AlphaSimR: MapPop-class – R documentation

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MapPop-class

Raw population with genetic map

Description

Extends RawPop-class to add a genetic map. This is the first object created in a simulation. It is used for creating initial populations and setting traits in the SimParam.

Usage

## S4 method for signature 'MapPop'
x[i]

## S4 method for signature 'MapPop'
c(x, ...)

Arguments

`x`	a 'MapPop' object
`i`	index of chromosomes
`...`	aditional 'MapPop' objects

Methods (by generic)

[: Extract MapPop by index
c: Combine multiple MapPops

Slots

genMap: "matrix" of chromsome genetic maps
centromere: vector of centromere positions

AlphaSimR

Breeding Program Simulations

v0.13.0

MIT + file LICENSE

Authors

Chris Gaynor [aut, cre] (<https://orcid.org/0000-0003-0558-6656>), Gregor Gorjanc [aut] (<https://orcid.org/0000-0001-8008-2787>), John Hickey [aut] (<https://orcid.org/0000-0001-5675-3974>), Daniel Money [ctb] (<https://orcid.org/0000-0001-5151-3648>), David Wilson [ctb]

Initial release

2020-10-20