Generates DH lines
Creates DH lines from each individual in a population.
Only works with diploid individuals. For polyploids, use
reduceGenome and doubleGenome.
makeDH(pop, nDH = 1, useFemale = TRUE, keepParents = TRUE, simParam = NULL)
pop |
an object of 'Pop' superclass |
nDH |
total number of DH lines per individual |
useFemale |
should female recombination rates be used. |
keepParents |
should previous parents be used for mother and father. |
simParam |
an object of 'SimParam' class |
Returns an object of Pop-class
#Create founder haplotypes founderPop = quickHaplo(nInd=2, nChr=1, segSites=10) #Set simulation parameters SP = SimParam$new(founderPop) #Create population pop = newPop(founderPop, simParam=SP) #Create 1 DH for each individual pop2 = makeDH(pop, simParam=SP)
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