Select individuals
Selects a subset of nInd individuals from a population.
selectInd( pop, nInd, trait = 1, use = "pheno", sex = "B", selectTop = TRUE, returnPop = TRUE, candidates = NULL, simParam = NULL, ... )
pop |
and object of |
nInd |
the number of individuals to select |
trait |
the trait for selection. Either a number indicating a single trait or a function returning a vector of length nInd. |
use |
select on genetic values "gv", estimated breeding values "ebv", breeding values "bv", phenotypes "pheno", or randomly "rand" |
sex |
which sex to select. Use "B" for both, "F" for females and "M" for males. If the simulation is not using sexes, the argument is ignored. |
selectTop |
selects highest values if true. Selects lowest values if false. |
returnPop |
should results be returned as a
|
candidates |
an optional vector of eligible selection candidates. |
simParam |
an object of |
... |
additional arguments if using a function for trait |
Returns an object of Pop-class or
HybridPop-class
#Create founder haplotypes founderPop = quickHaplo(nInd=10, nChr=1, segSites=10) #Set simulation parameters SP = SimParam$new(founderPop) SP$addTraitA(10) SP$setVarE(h2=0.5) #Create population pop = newPop(founderPop, simParam=SP) #Select best 5 pop2 = selectInd(pop, 5, simParam=SP)
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