Class "CNOlist"
This function takes as input the filename of a MIDAS file (or the list returned by makeCNOlist) and returns an instance of CNOlist class. It provides an object oriented approach to manipulate CNOlist. This function calls readMIDAS and makeCNOlist.
Objects can be created by calls of the form new("CNOlist", ...).
cues:Object of class "matrix"
inhibitors:Object of class "matrix"
stimuli:Object of class "matrix"
signals:Object of class "list"
variances:Object of class "list"
timepoints:Object of class "vector" timepoints
contained in the signals matrix.
See CNOlist-methods for details
Available methods are plot, compatCNOlist, randomize, length. See CNOlist-methods for details.
T. Cokelaer
showClass("CNOlist")
files<-dir(system.file("ToyModel",package="CellNOptR"),full=TRUE)
cnolist = CNOlist(files[[1]])
# getters:
getCues(cnolist)
getInhibitors(cnolist)
getSignals(cnolist)
getVariances(cnolist)
getTimepoints(cnolist)
getStimuli(cnolist)
# In version 1.3.30 and above, use the plot method instead of former plotCNOlist function.
plot(cnolist)
new_cnolist = randomize(cnolist)
length(cnolist)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.