Subset a HeatmapList object
Subset a HeatmapList object
## S3 method for class 'HeatmapList' x[i, j]
x |
A |
i |
row indices |
j |
column indices |
If the heatmap list is horizontal, i is the row indices and j corresponds to heatmap names and single annotation names.
and if the heatlist is vertical, i corresponds to heatmap/annotation names and j is the column indices.
ht_list = Heatmap(matrix(rnorm(100), 10), name = "rnorm") +
rowAnnotation(foo = 1:10, bar = anno_points(10:1)) +
Heatmap(matrix(runif(100), 10), name = "runif")
summary(ht_list[1:5, ])
summary(ht_list[1:5, 1])
summary(ht_list[1:5, "rnorm"])
summary(ht_list[1:5, c("rnorm", "foo")])
ht_list = Heatmap(matrix(rnorm(100), 10), name = "rnorm") %v%
columnAnnotation(foo = 1:10, bar = anno_points(10:1)) %v%
Heatmap(matrix(runif(100), 10), name = "runif")
summary(ht_list[, 1:5])
summary(ht_list[1, 1:5])
summary(ht_list["rnorm", 1:5])
summary(ht_list[c("rnorm", "foo"), 1:5])Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.