data.tree: DefaultPlotHeight – R documentation

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DefaultPlotHeight

Calculates the height of a Node given the height of the root.

Description

This function puts leafs at the bottom (not hanging), and makes edges equally long. Useful for easy plotting with third-party packages, e.g. if you have no specific height attribute, e.g. with as.dendrogram.Node, ToNewick, and as.phylo.Node

Usage

DefaultPlotHeight(node, rootHeight = 100)

Arguments

`node`	The node
`rootHeight`	The height of the root

Examples

data(acme)
dacme <- as.dendrogram(acme, heightAttribute = function(x) DefaultPlotHeight(x, 200))
plot(dacme, center = TRUE)

data.tree

General Purpose Hierarchical Data Structure

v1.0.0

GPL (>= 2)

Authors

Russ Hyde [ctb] (improve dependencies), Chris Hammill [ctb] (improve getting), Facundo Munoz [ctb] (improve list conversion), Markus Wamser [ctb] (fixed some typos), Pierre Formont [ctb] (additional features), Kent Russel [ctb] (documentation), Noam Ross [ctb] (fixes), Duncan Garmonsway [ctb] (fixes), Christoph Glur [aut, cre] (R interface)

Initial release

2020-07-31