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dinamic

DiNAMIC A Method To Analyze Recurrent DNA Copy Number Aberrations in Tumors

This function implements the DiNAMIC procedure for assessing the statistical significance of recurrent DNA copy number aberrations (Bioinformatics (2011) 27(5) 678 - 685).

Functions (10)

annot.file

A Cytoband Annotation Data Frame

detailedLook

Assessing the Significance of Recurrent DNA Copy Number Aberrations

dinamic-package

Assessing the Statistical Significance of Recurrent DNA Copy Number Aberrations

findNull

Find DiNAMIC's Null Distribution

makeCytoband

Find the Chromosome Arm for Each Marker

peeling

Apply the Peeling Procedure at a Given Marker

quickLook

Assessing the Significance of Recurrent DNA Copy Number Aberrations

recodeBinary

Recode Binary Vectors

wilms.data

DNA Copy Number Data from Natrajan et al. (2006)

wilms.markers

aCGH Marker Data from Natrajan et al. (2006)

dinamic

DiNAMIC A Method To Analyze Recurrent DNA Copy Number Aberrations in Tumors

v1.0

GPL-2

Authors

Vonn Walter, Andrew B. Nobel, and Fred A. Wright

Initial release

2011-10-24

dinamic

Functions (10)

dinamic

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