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fortify

fortify

Description

convert compareClusterResult to a data.frame that ready for plot

convert enrichResult object for ggplot2

Usage

## S3 method for class 'compareClusterResult'
fortify(
  model,
  data,
  showCategory = 5,
  by = "geneRatio",
  split = NULL,
  includeAll = TRUE
)

## S3 method for class 'enrichResult'
fortify(
  model,
  data,
  showCategory = 5,
  by = "Count",
  order = FALSE,
  drop = FALSE,
  split = NULL,
  ...
)

Arguments

model

'enrichResult' or 'compareClusterResult' object
data

not use here
showCategory

Category numbers to show
by

one of Count and GeneRatio
split

separate result by 'split' variable
includeAll

logical
order

logical
drop

logical
...

additional parameter

Value

data.frame

data.frame

Author(s)

Guangchuang Yu

enrichplot

Visualization of Functional Enrichment Result

v1.10.2
Artistic-2.0
Authors
Guangchuang Yu [aut, cre] (<https://orcid.org/0000-0002-6485-8781>), Erqiang Hu [ctb]
Initial release

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