The 'enrichplot' package implements several visualization methods for interpreting functional enrichment results obtained from ORA or GSEA analysis.
All the visualization methods are developed based on 'ggplot2' graphics.

Visualization of Functional Enrichment Result

package-ubuntu-20.04-r-4.0.5#cran#enrichplot-1.10.2

pmcplot(query, period, proportion = TRUE)

<table summary="R argblock">
<tr valign="top">
<td><code>query</code></td>
<td>
<p>query terms</p>
</td>
</tr>
<tr valign="top">
<td><code>period</code></td>
<td>
<p>period of query in the unit of year</p>
</td>
</tr>
<tr valign="top">
<td><code>proportion</code></td>
<td>
<p>If TRUE, use query_hits/all_hits, otherwise use query_hits</p>
</td>
</tr>
</table>

package-ubuntu-20.04-r-4.0.5#cran#enrichplot-1.10.2#docs#pmcplot

pmcplot

Description

Usage

Arguments

Value

Author(s)

enrichplot

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`query`	query terms
`period`	period of query in the unit of year
`proportion`	If TRUE, use query_hits/all_hits, otherwise use query_hits