fslr: eddy_correct – R documentation

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eddy_correct

Eddy Current Correction

This function calls eddy_correct from FSL for DTI Processing

eddy_correct(infile, outfile = NULL, retimg = TRUE, reference_no = 0,
  ...)

`infile`	input filename of 4D image.
`outfile`	Output filename
`retimg`	(logical) return image of class nifti
`reference_no`	Set the volume number for the reference volume that will be used as a target to register all other volumes to. (default=0, i.e. the first volume)
`...`	Additional arguments passed to `fslcmd`

If retimg then object of class nifti. Otherwise, Result from system command, depends if intern is TRUE or FALSE.

Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')

v2.24.1

GPL-3

Authors

John Muschelli [aut, cre] (<https://orcid.org/0000-0001-6469-1750>)

Initial release