Log Transform Image using FSL
This function calls fslmaths -log.
The R functions wraps fslmaths
fsl_log(..., outfile = tempfile(fileext = ".nii.gz"), retimg = FALSE) fsllog(file, outfile = NULL, retimg = TRUE, reorient = FALSE, intern = FALSE, opts = "", ...)
... |
additional arguments passed to |
outfile |
(character) resultant image name (optional) |
retimg |
(logical) return image of class nifti |
file |
(character) input image to log transform |
reorient |
(logical) If retimg, should file be reoriented
when read in?
Passed to |
intern |
(logical) to be passed to |
opts |
(character) operations to be passed to |
If retimg then object of class nifti. Otherwise,
Result from system command, depends if intern is TRUE or FALSE.
Functions with underscores have different defaults and will return an output filename, so to be used for piping
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