FSL Orient to MNI
This function calls fslreorient2std
fslreorient2std(file, retimg = TRUE, reorient = FALSE, intern = FALSE, verbose = TRUE, opts = "", ...) fslreorient2std_mat(file, matfile = tempfile(fileext = ".mat"), verbose = TRUE, ...)
file |
(character) image to be manipulated |
retimg |
(logical) return image of class nifti |
reorient |
(logical) If |
intern |
(logical) to be passed to |
verbose |
(logical) print out command before running |
opts |
additional options to pass to |
... |
additional arguments passed to |
matfile |
Output file for the matrix for reorientation |
If retimg then object of class nifti. Otherwise,
Result from system command, depends if intern is TRUE or FALSE.
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