fslr: fslsplit – R documentation

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fslsplit

Split images using FSL

Description

This function calls fslsplit to merge files on some dimension and either saves the image or returns an object of class nifti

Usage

fslsplit(infile, direction = c("t", "x", "y", "z"),
  output_basename = NULL, retimg = TRUE, reorient = FALSE,
  verbose = TRUE)

fsl_split(..., retimg = FALSE)

Arguments

`infile`	(character) input filename
`direction`	(character) direction to split over: t (time), x, y, z
`output_basename`	(character) prefix to have for output
`retimg`	(logical) return image of class nifti
`reorient`	(logical) If retimg, should file be reoriented when read in? Passed to `readnii`.
`verbose`	(logical) print out command before running
`...`	not used

Value

List of output files

Note

Functions with underscores have different defaults and will return an output filename, so to be used for piping

fslr

Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')

v2.24.1

GPL-3

Authors

John Muschelli [aut, cre] (<https://orcid.org/0000-0001-6469-1750>)

Initial release