Plotting random effects
This is the plotting method for random effects (simple random intercepts).
## S3 method for class 'multi.random.effect' plot(x, trans = identity, ...) ## S3 method for class 'random.effect' plot(x, trans = identity, ...)
x |
a random effect object, extracted using mgcViz::sm. |
trans |
monotonic function to apply to the fit, confidence intervals and residuals, before plotting. Monotonicity is not checked. |
... |
currently unused. |
An object of class plotSmooth.
library(mgcViz) b <- gam(travel~s(Rail,bs="re"), data=Rail, method="REML") b <- getViz(b) plot(sm(b, 1)) + l_fitLine(colour = 2, linetype = 2) + l_points() + l_ciLine(colour = 4, linetype = 3) plot(sm(b, 1)) + l_ciPoly() + l_points() # Default plot(b) ### # Quantile GAM version ### b <- mqgamV(travel~s(Rail,bs="re"), data=as.data.frame(Rail), qu = c(0.2, 0.4, 0.6, 0.8)) plot(sm(b, 1)) + l_ciPoly() + l_points() # Default plot(b)
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