pedprobr: HWprob – R documentation

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HWprob

Hardy-Weinberg probabilities

Hardy-Weinberg probabilities

HWprob(allele1, allele2, afreq, f = 0)

`allele1, allele2`	Vectors of equal length, containing alleles in the form of indices of `afreq`
`afreq`	A numeric vector with allele frequencies
`f`	A single number in `[0, 1]`; the inbreeding coefficient

A numeric vector of the same length as allele1 and allele2

p = 0.1; q = 1-p
hw = HWprob(c(1,1,2), c(1,2,2), c(p, q))
stopifnot(all.equal(hw, c(p^2, 2*p*q, q^2)))

Probability Computations on Pedigrees

v0.5.0

GPL-3

Authors

Magnus Dehli Vigeland [aut, cre] (<https://orcid.org/0000-0002-9134-4962>)

Initial release