An implementation of the Elston-Stewart algorithm for calculating
pedigree likelihoods given genetic marker data (Elston and Stewart (1971)
<doi:10.1159/000152448>). The standard algorithm is extended to allow inbred
founders. 'pedprobr' is part of the ped suite, a collection of packages for
pedigree analysis in R, based on 'pedtools' for handling pedigrees and
markers. Mutation modelling is supported by the 'pedmut' package.

Probability Computations on Pedigrees

package-ubuntu-20.04-r-4.0.5#cran#pedprobr-0.5.0

<p>An autosomal marker with <code>n</code> alleles has <code>choose(n+1, 2)</code> possible
unordered genotypes. This function returns these as rows in a
matrix.
</p>

<table summary="R argblock"><tr valign="top">
<td><code>n</code></td>
<td>
<p>A positive integer.</p>
</td>
</tr></table>

<p>An integer matrix with two columns and <code>choose(n+1, 2)</code> rows.
</p>

package-ubuntu-20.04-r-4.0.5#cran#pedprobr-0.5.0#docs#allGenotypes

allGenotypes

Description

Usage

Arguments

Value

Examples

pedprobr

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