qpcR: pcrGOF – R documentation

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pcrGOF

Summarize measures for the goodness-of-fit

Description

Calculates all implemented measures for the goodness-of-fit and returns them as a list. Works for objects of class pcrfit, lm, glm, nls, drc and many others...

Usage

pcrGOF(object, PRESS = FALSE)

Arguments

`object`	a fitted object.
`PRESS`	logical. If `TRUE`, the more calculation intensive P^2 is also returned.

Value

A list with all implemented Information criteria (AIC, AICc, BIC), residual variance, root-mean-squared-error, the reduced χ_{ν}^2 from fitchisq (if replicates) and the PRESS P^2 value (if PRESS = TRUE).

Author(s)

Andrej-Nikolai Spiess

Examples

## Single fit without replicates
## including PRESS statistic.
m1 <- pcrfit(reps, 1, 2, l5)
pcrGOF(m1, PRESS = TRUE)

## Fit containing replicates:
## calculation of reduced 
## chi-square included!
m2 <- pcrfit(reps, 1, 2:5, l5)
pcrGOF(m2)

qpcR

Modelling and Analysis of Real-Time PCR Data

v1.4-1

GPL (>= 2)

Authors

Andrej-Nikolai Spiess <a.spiess@uke.uni-hamburg.de>

Initial release

2018-05-29