Find gaps in a genetic map
Find gaps between markers in a genetic map
find_map_gaps(map, min_gap = 50)
map |
Genetic map as a list of vectors (each vector is a chromosome and contains the marker positions). |
min_gap |
Minimum gap length to return. |
Data frame with 6 columns: chromosome, marker to left of gap, numeric index of marker to left, marker to right of gap, numeric index of marker to right, and the length of the gap.
iron <- read_cross2(system.file("extdata", "iron.zip", package="qtl2"))
find_map_gaps(iron$gmap, 40)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.