Get Complexes That Include a Molecule
This function will retrieve a list of complexes that include your provided molecule as a component.
rba_reactome_complex_list(id, resource, ...)
id |
Molecule's external Identifier |
resource |
What is the resource of your provided ID? see: Reactome External Identifiers |
... |
rbioapi option(s). Refer to |
Data frame where each row is a complex containing your provided molecule and columns are pertinent information.
"GET https://reactome.org/ContentService/data/complexes/resource/ identifier"
Jassal B, Matthews L, Viteri G, Gong C, Lorente P, Fabregat A, Sidiropoulos K, Cook J, Gillespie M, Haw R, Loney F, May B, Milacic M, Rothfels K, Sevilla C, Shamovsky V, Shorser S, Varusai T, Weiser J, Wu G, Stein L, Hermjakob H, D'Eustachio P. The reactome pathway knowledgebase. Nucleic Acids Res. 2020 Jan 8;48(D1):D498-D503. doi: 10.1093/nar/gkz1031. PubMed PMID: 31691815.
Other "Reactome Content Service - Physical Entity Queries":
rba_reactome_complex_subunits(),
rba_reactome_entity_other_forms(),
rba_reactome_participant_of()
rba_reactome_complex_list(id = "3845", resource = "NCBI Gene") rba_reactome_complex_list(id = "P00533", resource = "UniProt")
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