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rba_reactome_entity_other_forms

Get Other forms of a Reactome Entity


Description

This function retrieve a list containing all other forms of your provided Physical Entity ID.

Usage

rba_reactome_entity_other_forms(entity_id, ...)

Arguments

entity_id

Reactome's entity ID.

...

rbioapi option(s). Refer to rba_options's arguments documentation for more information on available options.

Details

According to Reactome API documentation, "These other forms are Physical Entities that share the same Reference Entity identifier, e.g. PTEN H93R R-HSA-2318524 and PTEN C124R R-HSA-2317439 are two forms of PTEN."

Value

Data frame where each row is other forms of your provided Entity ID and columns are pertinent information.

Corresponding API Resources

"GET https://reactome.org/ContentService/data/entity/id/otherForms"

References

  • Jassal B, Matthews L, Viteri G, Gong C, Lorente P, Fabregat A, Sidiropoulos K, Cook J, Gillespie M, Haw R, Loney F, May B, Milacic M, Rothfels K, Sevilla C, Shamovsky V, Shorser S, Varusai T, Weiser J, Wu G, Stein L, Hermjakob H, D'Eustachio P. The reactome pathway knowledgebase. Nucleic Acids Res. 2020 Jan 8;48(D1):D498-D503. doi: 10.1093/nar/gkz1031. PubMed PMID: 31691815.

  • Reactome Content Services API Documentation

See Also

Other "Reactome Content Service - Physical Entity Queries": rba_reactome_complex_list(), rba_reactome_complex_subunits(), rba_reactome_participant_of()

Examples

rba_reactome_entity_other_forms("R-HSA-199420")

rbioapi

User-Friendly R Interface to Biologic Web Services' API

v0.7.0
GPL-3
Authors
Moosa Rezwani [aut, cre, cph]
Initial release

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