Phylogenetic tree generally contains multiple components including node, edge, branch and associated data. 'tidytree' provides an approach to convert tree object to tidy data frame as well as provides tidy interfaces to manipulate tree data.

A Tidy Tool for Phylogenetic Tree Data Manipulation

package-ubuntu-20.04-r-4.0.5#cran#tidytree-0.3.3

<table summary="R argblock">
<tr valign="top">
<td><code>.data</code></td>
<td>
<p>tree object (phylo, treedata, tbl_tree, ggtree etc.)</p>
</td>
</tr>
<tr valign="top">
<td><code>.node</code></td>
<td>
<p>selected nodes</p>
</td>
</tr>
<tr valign="top">
<td><code>...</code></td>
<td>
<p>additional parameter</p>
</td>
</tr>
</table>

<p>updated tree with group information or group index
</p>

package-ubuntu-20.04-r-4.0.5#cran#tidytree-0.3.3#docs#groupOTU

groupOTU

Description

Usage

Arguments

Value

Author(s)

tidytree

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`.data`	tree object (phylo, treedata, tbl_tree, ggtree etc.)
`.node`	selected nodes
`...`	additional parameter