Get a Complex's Subunits
This function will return a list of subunits which are participants of your provided complex.
rba_reactome_complex_subunits(complex_id, exclude_structures = FALSE, ...)
complex_id |
Reactome stable Identifier of the complex. |
exclude_structures |
(logical) Should the contained complexes and entity sets be excluded from the results? (default = FALSE) |
... |
rbioapi option(s). Refer to |
Subunits will be returned recursively; Which means that if a subunit was itself a complex, subunit of that complex will be also returned in the results.
Data frame which each row is a subunit of your provided complex and the columns are pertinent information of that subunit.
"GET https://reactome.org/ContentService/data/complex/id/subunits"
Jassal B, Matthews L, Viteri G, Gong C, Lorente P, Fabregat A, Sidiropoulos K, Cook J, Gillespie M, Haw R, Loney F, May B, Milacic M, Rothfels K, Sevilla C, Shamovsky V, Shorser S, Varusai T, Weiser J, Wu G, Stein L, Hermjakob H, D'Eustachio P. The reactome pathway knowledgebase. Nucleic Acids Res. 2020 Jan 8;48(D1):D498-D503. doi: 10.1093/nar/gkz1031. PubMed PMID: 31691815.
Other "Reactome Content Service - Physical Entity Queries":
rba_reactome_complex_list(),
rba_reactome_entity_other_forms(),
rba_reactome_participant_of()
rba_reactome_complex_subunits(complex_id = "R-HSA-5674003",
exclude_structures = FALSE)
rba_reactome_complex_subunits(complex_id = "R-HSA-109783",
exclude_structures = TRUE)Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.