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msgfParInstrument-class

A class handling instrument types


Description

This class defines an instrument type and provides methods to get correct system call parameters.

Usage

## S4 method for signature 'msgfParInstrument'
show(object)

## S4 method for signature 'msgfParInstrument'
length(x)

## S4 method for signature 'msgfParInstrument'
getMSGFpar(object)

msgfParInstrument(instrument)

Arguments

object

An msgfParInstrument object

x

An msgfParInstrument object

instrument

An integer specifying the instrument type

Value

For length() An integer.

For getMSGFpar() A string.

For msgfParInstrument() An msgfParInstrument object.

Methods (by generic)

  • show: Short summary of msgfParInstrument object

  • length: Report the length of an msgfParInstrument object

  • getMSGFpar: Get system compliant function call

Slots

instrument

An integer specifying the instrument type

See Also

Examples

instrument <- msgfParInstrument(1)
instrument <- msgfParInstrument('HighRes')

MSGFplus

An interface between R and MS-GF+

v1.24.0
GPL (>= 2)
Authors
Thomas Lin Pedersen
Initial release
2020-09-01

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