A class handling number of matches
This class defines a number of matches and provides methods to get correct system call parameters.
## S4 method for signature 'msgfParMatches' show(object) ## S4 method for signature 'msgfParMatches' length(x) ## S4 method for signature 'msgfParMatches' getMSGFpar(object) msgfParMatches(value)
object |
An msgfParMatches object |
x |
An msgfParMatches object |
value |
An integer giving the number of matches that should be returned per spectrum |
For length() An integer.
For getMSGFpar() A string.
For msgfParMatches() An msgfParMatches object.
show: Short summary of msgfParMatches object
length: Report the length of an msgfParMatches object
getMSGFpar: Get system compliant function
call
valueAn integer giving the number of matches per spectrum reported by MS-GF+
Other msgfParClasses: msgfPar-class,
msgfParChargeRange-class,
msgfParEnzyme-class,
msgfParFragmentation-class,
msgfParInstrument-class,
msgfParIsotopeError-class,
msgfParLengthRange-class,
msgfParModification-class,
msgfParModificationList-class,
msgfParNtt-class,
msgfParProtocol-class,
msgfParTda-class,
msgfParTolerance-class,
msgfPar
matches <- msgfParMatches(5)
Please choose more modern alternatives, such as Google Chrome or Mozilla Firefox.